STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0799KEGG: eli:ELI_13595 hypothetical protein. (196 aa)    
Predicted Functional Partners:
Sros_0800
Membrane protein-like protein; KEGG: xca:xccb100_3923 hypothetical protein.
 
  
0.921
Sros_6784
KEGG: sml:Smlt4170 putative transmembrane protein.
  
 0.886
Sros_0801
KEGG: bbt:BBta_0063 hypothetical protein.
  
    0.754
Sros_9325
Hypothetical protein; KEGG: pin:Ping_2576 membrane-flanked domain- containing protein.
 
  
 0.577
Sros_1327
Hypothetical protein; KEGG: sus:Acid_2133 membrane-flanked domain- containing protein.
  
  
 0.508
Sros_0802
Hypothetical protein.
       0.488
Sros_0803
Hypothetical protein.
       0.488
Sros_0798
KEGG: ret:RHE_CH00088 glycine cleavage system T protein; Belongs to the GcvT family.
       0.451
Sros_1772
KEGG: bsu:BSU34820 hypothetical protein.
  
     0.446
Sros_7022
Hypothetical protein; KEGG: noc:Noc_A0008 endonuclease/exonuclease/phosphatase.
  
   
 0.435
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.