STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0810Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: mxa:MXAN_2749 ATPase. (317 aa)    
Predicted Functional Partners:
Sros_0809
KEGG: mca:MCA2071 hypothetical protein.
       0.792
Sros_7544
Signal transduction histidine kinase-like protein; KEGG: bra:BRADO5752 sensor histidine kinase.
  
 
 0.623
Sros_8060
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein; KEGG: ppd:Ppro_2997 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
  
 
 0.580
Sros_2071
Hypothetical protein.
  
     0.562
Sros_8460
KEGG: mag:amb3537 serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.555
Sros_8303
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; KEGG: bha:BH0529 RNA polymerase sigma factor SigB; Belongs to the sigma-70 factor family.
 
 
 0.529
Sros_1376
KEGG: swi:Swit_0717 FO synthase.
   
    0.517
Sros_5852
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein.
 
 
 0.517
Sros_1577
KEGG: mno:Mnod_1197 beta-lactamase domain protein.
  
     0.516
Sros_1009
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: sfu:Sfum_2453 serine phosphatase.
  
 
 0.513
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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