STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0829ATPase-like protein; KEGG: bbt:BBta_1892 transcriptional regulator. (1092 aa)    
Predicted Functional Partners:
Sros_0830
KEGG: sme:SMc01571 putative oxidoreductase protein.
       0.520
Sros_8815
Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase.
  
   
 0.479
Sros_7942
KEGG: scl:sce5225 protein kinase.
 
  
0.465
Sros_4296
Transcriptional regulator, SARP family; KEGG: scl:sce5225 protein kinase.
 
  
0.424
Sros_1058
KEGG: scl:sce5225 protein kinase.
 
   
0.411
Sros_3384
Transcriptional regulator, SARP family; KEGG: GK11758 gene product from transcript GK11758- RA.
 
  
0.409
Sros_6865
KEGG: afw:Anae109_3667 ATPase-like protein.
 
   
0.409
Sros_3657
Transcriptional regulator, SARP family; KEGG: scl:sce8759 hypothetical protein.
 
  
0.403
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.