STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0830KEGG: sme:SMc01571 putative oxidoreductase protein. (253 aa)    
Predicted Functional Partners:
Sros_8710
Short-chain alcohol dehydrogenase of unknown specificity-like protein; KEGG: cak:Caul_0159 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.756
Sros_6486
KEGG: hypothetical protein.
 
    0.652
Sros_6375
KEGG: mpt:Mpe_A0036 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.622
Sros_4582
KEGG: bxe:Bxe_B2739 short-chain dehydrogenase/reductase SDR.
  
     0.609
Sros_2067
KEGG: nar:Saro_3760 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.596
Sros_6514
KEGG: sus:Acid_0540 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.590
Sros_0363
KEGG: mxa:MXAN_0865 oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.574
Sros_0833
Hypothetical protein.
   
   0.573
Sros_7619
KEGG: mlo:mll2196 short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.554
Sros_0831
KEGG: pmy:Pmen_3210 major facilitator transporter.
       0.551
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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