STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_0911KEGG: shn:Shewana3_1825 ATPase-like protein. (989 aa)    
Predicted Functional Partners:
Sros_9326
Putative transcriptional regulator, XRE family; KEGG: ank:AnaeK_0453 MJ0042 family finger-like protein.
 
     0.772
Sros_8401
KEGG: hypothetical protein LOC739882.
  
     0.769
Sros_5721
KEGG: ade:Adeh_3797 hypothetical protein.
 
     0.767
Sros_2570
Hypothetical protein; KEGG: baa:BA_2243 HTH_XRE, helix-turn-helix XRE- family like proteins.
 
     0.763
Sros_0545
Hypothetical protein; KEGG: GK17443 gene product from transcript GK17443- RA.
  
     0.758
Sros_8471
Hypothetical protein; KEGG: bpm:BURPS1710b_1102 putative lipoprotein.
 
     0.746
Sros_1071
Hypothetical protein.
  
     0.742
Sros_8364
KEGG: xcv:XCV3308 putative siderophore biosynthesis protein.
  
     0.735
Sros_6679
Hypothetical protein; KEGG: scl:sce2632 calcineurin-like phosphoesterase family protein.
 
   
 0.732
Sros_3310
KEGG: bra:BRADO0536 hypothetical protein.
  
     0.729
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.