Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sros_1021 | Sros_1022 | KEGG: ank:AnaeK_2985 WD40 domain protein beta propeller. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
Sros_1021 | Sros_1023 | KEGG: ank:AnaeK_2985 WD40 domain protein beta propeller. | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | 0.443 |
Sros_1021 | Sros_1024 | KEGG: ank:AnaeK_2985 WD40 domain protein beta propeller. | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | 0.443 |
Sros_1022 | Sros_1021 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | KEGG: ank:AnaeK_2985 WD40 domain protein beta propeller. | 0.773 |
Sros_1022 | Sros_1023 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | 0.443 |
Sros_1022 | Sros_1024 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | 0.453 |
Sros_1023 | Sros_1021 | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | KEGG: ank:AnaeK_2985 WD40 domain protein beta propeller. | 0.443 |
Sros_1023 | Sros_1022 | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.443 |
Sros_1023 | Sros_1024 | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | 0.773 |
Sros_1023 | Sros_1025 | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | KEGG: scl:sce5225 protein kinase. | 0.547 |
Sros_1024 | Sros_1021 | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | KEGG: ank:AnaeK_2985 WD40 domain protein beta propeller. | 0.443 |
Sros_1024 | Sros_1022 | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.453 |
Sros_1024 | Sros_1023 | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | 0.773 |
Sros_1024 | Sros_1025 | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | KEGG: scl:sce5225 protein kinase. | 0.547 |
Sros_1025 | Sros_1023 | KEGG: scl:sce5225 protein kinase. | Bifunctional deaminase-reductase-like protein; KEGG: mes:Meso_2196 bifunctional deaminase- reductase-like. | 0.547 |
Sros_1025 | Sros_1024 | KEGG: scl:sce5225 protein kinase. | Flavoprotein; KEGG: hch:HCH_01442 flavoprotein. | 0.547 |