STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1302DNA segregation ATPase FtsK/SpoIIIE and related protein-like protein; KEGG: bar:GBAA2190 FtsK/SpoIIIE family protein. (1528 aa)    
Predicted Functional Partners:
Sros_8096
Hypothetical protein; Belongs to the WXG100 family.
  
 
 0.964
Sros_8100
KEGG: xau:Xaut_2507 hypothetical protein.
  
 
 0.950
Sros_0911
KEGG: shn:Shewana3_1825 ATPase-like protein.
 
     0.655
Sros_5721
KEGG: ade:Adeh_3797 hypothetical protein.
 
     0.640
Sros_1313
Hypothetical protein; KEGG: scl:sce7264 ribonuclease G.
 
     0.635
Sros_2570
Hypothetical protein; KEGG: baa:BA_2243 HTH_XRE, helix-turn-helix XRE- family like proteins.
 
     0.605
Sros_1305
Hypothetical protein.
 
   
 0.572
Sros_7060
Hypothetical protein; KEGG: dat:HRM2_26400 putative alkaline serine protease (subtilase family protein).
 
 
 0.568
Sros_1308
Hypothetical protein; KEGG: vsp:VS_0024 putative bacterial type II secretion system protein, TadC-like protein.
 
   
 0.558
Sros_9326
Putative transcriptional regulator, XRE family; KEGG: ank:AnaeK_0453 MJ0042 family finger-like protein.
 
     0.546
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.