STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1322KEGG: afw:Anae109_2050 hypothetical protein. (539 aa)    
Predicted Functional Partners:
Sros_1321
KEGG: ank:AnaeK_2072 ABC transporter-related protein.
 
  
 0.948
Sros_1227
Hypothetical protein; KEGG: predicted gene, 100042292.
 
  
 0.834
Sros_2510
Hypothetical protein.
  
     0.745
Sros_3225
KEGG: rsh:Rsph17029_3724 hypothetical protein.
  
     0.709
Sros_9294
Transcriptional regulator, SARP family; KEGG: scl:sce5225 protein kinase.
  
     0.689
Sros_1555
KEGG: ret:RHE_PC00178 hypothetical protein.
  
     0.668
Sros_8401
KEGG: hypothetical protein LOC739882.
  
    0.667
Sros_2334
Hypothetical protein; KEGG: sfu:Sfum_2920 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.656
Sros_7139
KEGG: TP23; basic proline-rich protein.
  
     0.655
Sros_8466
KEGG: Prb1; proline-rich protein BstNI subfamily 1.
  
     0.650
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.