STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1326KEGG: afw:Anae109_1479 biotin--acetyl-CoA- carboxylase ligase. (274 aa)    
Predicted Functional Partners:
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.969
Sros_4193
KEGG: gdj:Gdia_2052 acetyl-CoA carboxylase, biotin carboxylase.
 0.943
Sros_4192
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 
 0.942
Sros_8318
KEGG: bha:BH1132 acetyl-CoA carboxylase biotin carboxylase subunit.
  
 0.929
Sros_6358
KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.
  
 0.927
Sros_1299
KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.
  
 0.923
Sros_3798
KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.
  
 0.923
Sros_6412
KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.
  
 0.922
Sros_5380
KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain, ATP-binding.
  
 
 0.896
Sros_7058
KEGG: mxa:MXAN_1113 propionyl-CoA carboxylase, beta subunit.
 
 
 0.847
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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