STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1377Hypothetical protein. (584 aa)    
Predicted Functional Partners:
Sros_1875
KEGG: hypothetical LOC575627.
  
     0.721
Sros_1468
KEGG: acp:A2cp1_3283 hypothetical protein.
  
     0.716
Sros_1476
Hypothetical protein.
  
     0.697
Sros_1473
Hypothetical protein.
  
     0.652
Sros_1472
Hypothetical protein; KEGG: gme:Gmet_0588 TPR repeat-containing protein.
 
     0.636
Sros_1381
KEGG: ATPase, AAA family protein.
 
   
 0.604
Sros_8666
DNA segregation ATPase FtsK/SpoIIIE and related protein-like protein; KEGG: nis:NIS_0826 cell division protein FtsK.
 
     0.564
Sros_1376
KEGG: swi:Swit_0717 FO synthase.
  
    0.561
Sros_5885
KEGG: rso:RS03742 chelatase protein.
  
 
 0.540
Sros_8559
KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase, putative.
  
 
 0.540
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.