STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1433KEGG: hch:HCH_00429 cation transport ATPase. (1482 aa)    
Predicted Functional Partners:
Sros_4837
KEGG: sat:SYN_00043 gluconate kinase.
 
  
 0.797
Sros_4919
KEGG: dat:HRM2_21160 hypothetical protein.
  
 
 0.685
Sros_4122
KEGG: bpy:Bphyt_1985 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.660
Sros_6421
Cytochrome P450; KEGG: bur:Bcep18194_C6803 cytochrome P450.
  
 0.644
Sros_0015
Hypothetical protein; KEGG: rpi:Rpic_3544 heavy metal transport/detoxification protein.
  
 
 0.604
Sros_0018
KEGG: bmn:BMA10247_A2118 copper-translocating P- type ATPase.
  
 
 0.604
Sros_3701
KEGG: bmn:BMA10247_A2118 copper-translocating P- type ATPase.
  
 
 0.604
Sros_3704
Hypothetical protein; KEGG: rpi:Rpic_3544 heavy metal transport/detoxification protein.
  
 
 0.604
Sros_9003
KEGG: bsu:BSU33510 hypothetical protein.
  
 
 0.604
Sros_1434
Hypothetical protein; KEGG: GF21393 gene product from transcript GF21393- RA.
       0.599
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.