STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1459KEGG: afw:Anae109_2886 aldo/keto reductase. (320 aa)    
Predicted Functional Partners:
Sros_1460
KEGG: ade:Adeh_0115 serine/threonine protein kinase.
       0.563
Sros_1461
Transcriptional regulator, SARP family; KEGG: scl:sce3550 hypothetical protein.
       0.563
Sros_1458
KEGG: azc:AZC_0116 regulatory protein.
       0.545
Sros_9019
KEGG: mms:mma_3546 aldo/keto reductase family oxidoreductase.
 
 
0.450
Sros_7952
KEGG: met:M446_1420 2,5-didehydrogluconate reductase.
 
 
0.424
Sros_1462
KEGG: mch:Mchl_1848 hypothetical protein.
  
    0.400
Sros_1463
KEGG: oan:Oant_0490 OmpA/MotB domain protein.
  
    0.400
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.