STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1466Hypothetical protein; KEGG: ade:Adeh_3688 response regulator receiver domain-containing protein. (345 aa)    
Predicted Functional Partners:
Sros_1467
Acyl-CoA dehydrogenase-like protein; KEGG: bxe:Bxe_C0701 putative acyl-CoA dehydrogenase.
       0.603
Sros_1465
KEGG: nar:Saro_3161 acyl-CoA synthetase.
       0.531
Sros_1468
KEGG: acp:A2cp1_3283 hypothetical protein.
       0.528
Sros_1464
Putative serine protease PepD; KEGG: vsp:VS_0426 protease DegQ precursor.
       0.503
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.