STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1482Nucleic-acid-binding protein containing a Zn- ribbon-like protein; KEGG: reh:H16_A0870 hypothetical protein. (295 aa)    
Predicted Functional Partners:
Sros_1483
KEGG: dal:Dalk_4047 propanoyl-CoA C-acyltransferase.
 
 
 0.988
Sros_1484
KEGG: dal:Dalk_3344 propanoyl-CoA C-acyltransferase.
 
 
 0.973
Sros_1485
KEGG: pzu:PHZ_c2065 CoA synthetase, long-chain fatty acid:CoA ligase.
 
  
 0.924
Sros_8194
KEGG: shl:Shal_2113 lipid-transfer protein.
 
 
 0.869
Sros_8195
Dehydratase; KEGG: swi:Swit_3320 dehydratase.
 
 
 0.830
Sros_1481
KEGG: pla:Plav_0848 AMP-dependent synthetase and ligase.
 
  
 0.817
Sros_2065
KEGG: cti:RALTA_B0501 putative enoyl-CoA hydratase/isomerase.
 
   
 0.770
Sros_2064
KEGG: nar:Saro_3751 coenzyme A transferase.
 
     0.769
Sros_2063
KEGG: nar:Saro_3752 acyl CoA:acetate/3-ketoacid CoA transferase beta subunit-like protein.
 
     0.768
Sros_8196
KEGG: swi:Swit_3318 hypothetical protein.
  
   
 0.765
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.