STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1489Peptidase S41; KEGG: rpc:RPC_1724 peptidase S41. (317 aa)    
Predicted Functional Partners:
Sros_1931
N-acetyltransferase; KEGG: spe:Spro_1338 N-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.
  
     0.492
Sros_1490
KEGG: azo:azo0128 hypothetical protein.
       0.483
Sros_1491
Hypothetical protein.
       0.483
pheT
Phenylalanine--tRNA ligase; KEGG: ank:AnaeK_1907 phenylalanyl-tRNA synthetase, beta subunit.
   
 
 0.469
Sros_0227
Hypothetical protein; KEGG: hso:HS_1632 large adhesin.
 
   0.453
Sros_5227
KEGG: rsk:RSKD131_3142 NADP oxidoreductase coenzyme F420-dependent protein.
  
     0.432
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
  
 
 0.428
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
  
 
 0.428
Sros_1487
Hypothetical protein; KEGG: spe:Spro_2982 methyl-accepting chemotaxis sensory transducer.
       0.417
Sros_1488
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.417
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.