STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1543KEGG: scl:sce2291 protein kinase. (572 aa)    
Predicted Functional Partners:
Sros_1544
KEGG: scl:sce5120 protein kinase.
 
    
0.813
Sros_1542
KEGG: afw:Anae109_0235 protein kinase.
 
    
0.804
Sros_1541
Hypothetical protein; KEGG: ank:AnaeK_1751 serine/threonine protein kinase with TPR repeats.
 
    
0.743
Sros_5964
KEGG: mca:MCA1193 hypothetical protein.
  
     0.663
Sros_5495
Membrane protein-like protein; KEGG: jan:Jann_2342 hypothetical protein.
  
     0.612
Sros_5965
Molecular chaperone-like protein; KEGG: sus:Acid_6320 heat shock protein 70.
 
     0.603
Sros_8080
KEGG: bpd:BURPS668_A0166 rhs element Vgr protein.
  
     0.567
Sros_1381
KEGG: ATPase, AAA family protein.
 
    0.563
Sros_8081
Serine/threonine protein kinase-like protein; KEGG: rpe:RPE_2275 peptidase C14, caspase catalytic subunit P20.
  
     0.561
Sros_7624
KEGG: scl:sce8284 hypothetical protein.
  
 
   0.542
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.