STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1642Glycosyltransferase probably involved in cell wall biogenesis-like protein; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein. (566 aa)    
Predicted Functional Partners:
Sros_1641
Hypothetical protein; KEGG: scl:sce5794 glycosyltransferase.
   
 0.934
Sros_0630
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.809
Sros_1640
Hypothetical protein; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein.
 
  
0.794
Sros_1643
Hypothetical protein.
       0.779
Sros_1644
Hypothetical protein; KEGG: ecm:EcSMS35_2255 glycosyl transferase, group 1/glycosyl transferase, group 2.
  
 0.689
Sros_6403
Hypothetical protein; KEGG: GF21951 gene product from transcript GF21951- RA.
  
     0.628
Sros_8441
Hypothetical protein; KEGG: pen:PSEEN0303 RNA polymerase factor sigma-32.
 
     0.620
Sros_1645
KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein.
 
  
0.543
Sros_1260
KEGG: gur:Gura_2599 hypothetical protein.
  
     0.534
Sros_0842
KEGG: dol:Dole_0158 hypothetical protein.
  
     0.500
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.