Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Sros_1663Hypothetical protein; KEGG: cla:Cla_0457 sodium/proline symporter. (138 aa)    
Predicted Functional Partners:
Sros_0552
Hypothetical protein; KEGG: mrd:Mrad2831_5166 bifunctional DNA primase/polymerase.
  
     0.691
Sros_1664
Hypothetical protein.
       0.656
atpB
F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
 
     0.623
Sros_8950
Integral membrane protein-like protein; KEGG: psa:PST_3725 Mg2+ transport ATPase.
  
     0.591
Sros_7331
Hypothetical protein; KEGG: sbp:Sbal223_2107 NERD domain protein.
  
     0.585
Sros_7826
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.565
Sros_8996
Hypothetical protein.
  
     0.563
Sros_9371
KEGG: mpo:Mpop_2368 GLUG domain protein.
  
     0.563
Sros_8899
KEGG: nha:Nham_3709 hypothetical protein.
  
     0.556
Sros_1662
KEGG: scl:sce7324 glycosyltransferase.
       0.537
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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