STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1677KEGG: aba:Acid345_0284 ABC transporter, ATPase subunit. (353 aa)    
Predicted Functional Partners:
Sros_1678
Hypothetical protein; KEGG: sus:Acid_6966 ABC-2 type transporter.
 
  
 0.873
Sros_5992
Hypothetical protein; KEGG: scl:sce5572 putative integral membrane transport protein.
 
    0.686
Sros_9333
Hypothetical protein; KEGG: sus:Acid_6966 ABC-2 type transporter.
 
    0.657
Sros_3408
KEGG: bpd:BURPS668_2056 ABC-2 type transporter, permease protein.
 
    0.629
Sros_0825
ABC-type multidrug transport system permease component-like protein; KEGG: sus:Acid_6966 ABC-2 type transporter.
 
    0.613
Sros_4746
ABC-type multidrug transport system permease component-like protein; KEGG: sus:Acid_6966 ABC-2 type transporter.
 
    0.606
Sros_1679
KEGG: sus:Acid_1273 integral membrane sensor signal transduction histidine kinase.
    0.595
Sros_1686
Hypothetical protein; KEGG: sus:Acid_0080 ABC-2 type transporter.
  
 0.588
Sros_1775
KEGG: afw:Anae109_0945 ABC transporter related.
 
    0.552
Sros_0275
KEGG: sus:Acid_6966 ABC-2 type transporter.
 
    0.532
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.