STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1682KEGG: reu:Reut_B4936 TetR family transcriptional regulator. (201 aa)    
Predicted Functional Partners:
Sros_6308
KEGG: maq:Maqu_3067 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
     0.653
Sros_3928
Acyltransferase; KEGG: abo:ABO_2742 acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
     0.625
Sros_1528
KEGG: rce:RC1_2397 FAD-binding monooxygenase, putative.
  
     0.616
Sros_6818
KEGG: pla:Plav_0977 putative flavin-binding monooxygenase.
  
     0.547
Sros_0515
Molybdopterin dinucleotide-binding region; KEGG: dal:Dalk_0693 molydopterin dinucleotide- binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.527
Sros_0816
Molybdopterin dinucleotide-binding region; KEGG: dal:Dalk_0693 molydopterin dinucleotide- binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.527
Sros_8037
KEGG: bar:GBAA5513 hypothetical protein.
  
     0.519
Sros_3705
KEGG: bar:GBAA5513 hypothetical protein.
  
     0.512
Sros_1683
KEGG: scl:sce4495 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.500
Sros_3887
Saccharopine dehydrogenase (NAD(+), L-glutamate- forming); KEGG: hch:HCH_05374 hypothetical protein.
  
     0.483
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.