STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1683KEGG: scl:sce4495 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (494 aa)    
Predicted Functional Partners:
Sros_0780
KEGG: scl:sce5006 putative aldehyde dehydrogenase (NAD(+)).
 
     0.931
Sros_3464
KEGG: efe:EFER_0914 fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase.
 
    
 0.671
Sros_1682
KEGG: reu:Reut_B4936 TetR family transcriptional regulator.
       0.500
Sros_1684
KEGG: sml:Smlt2891 putative two-component system response regulator transcriptional regulatory protein.
  
    0.494
Sros_1685
Histidine kinase; KEGG: aca:ACP_2112 two component regulator propeller/histidine kinase domain protein.
       0.487
Sros_1686
Hypothetical protein; KEGG: sus:Acid_0080 ABC-2 type transporter.
       0.487
Sros_1252
KEGG: aca:ACP_1789 citrate synthase 2; Belongs to the citrate synthase family.
  
 
 0.424
Sros_1005
KEGG: mlo:mll3842 citrate synthase 2; Belongs to the citrate synthase family.
  
 
 0.416
Sros_3097
KEGG: baa:BA_0116 proline dehydrogenase.
 
 
 0.412
Sros_5566
KEGG: sus:Acid_1483 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
 
  
 0.405
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.