STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1704KEGG: pde:Pden_2371 thioredoxin domain. (310 aa)    
Predicted Functional Partners:
Sros_0550
KEGG: gme:Gmet_3235 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase.
  
    0.740
Sros_9376
KEGG: ank:AnaeK_4061 thioredoxin reductase.
  
 
 0.716
Sros_1703
KEGG: scl:sce7549 isobutyryl-CoA mutase.
       0.660
Sros_1705
KEGG: sus:Acid_6330 hypothetical protein.
       0.628
Sros_2038
KEGG: aca:ACP_2711 pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.598
Sros_6566
KEGG: aca:ACP_3043 alkylhydroperoxide reductase C.
  
 
 0.555
Sros_1702
Hypothetical protein; KEGG: sil:SPO0255 MarR family transcriptional regulator.
  
    0.545
Sros_5639
KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
 
 
 
 0.517
nucS
Nuclease of the RecB family-like protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
 
     0.509
Sros_2949
KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
   
 
 0.483
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.