STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1778KEGG: rce:RC1_3985 oxidoreductase, short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (228 aa)    
Predicted Functional Partners:
Sros_1779
KEGG: bbr:BB2432 allantoate amidohydrolase.
       0.590
Sros_1780
KEGG: mxa:MXAN_1010 N-formimino-L-glutamate deiminase.
       0.590
Sros_6830
Oxidoreductase; KEGG: scl:sce0805 oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.574
Sros_6514
KEGG: sus:Acid_0540 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.535
hutI
KEGG: dps:DP2351 imidazolonepropionase.
       0.519
Sros_6282
KEGG: pla:Plav_1657 short-chain dehydrogenase/reductase SDR.
 
    0.495
Sros_1777
Hypothetical protein; KEGG: dal:Dalk_2104 transcriptional regulator, PadR- like family.
       0.493
Sros_4522
KEGG: mno:Mnod_3482 short-chain dehydrogenase/reductase SDR.
 
    0.481
Sros_4393
KEGG: afw:Anae109_3278 short-chain dehydrogenase/reductase SDR.
 
    0.476
Sros_7174
KEGG: nar:Saro_3657 short-chain dehydrogenase/reductase SDR.
 
    0.470
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.