STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1874KEGG: rpc:RPC_0430 ABC transporter related. (236 aa)    
Predicted Functional Partners:
Sros_1873
Hypothetical protein; KEGG: ank:AnaeK_1332 SNARE associated Golgi protein.
     0.930
Sros_8051
KEGG: ank:AnaeK_3059 ABC transporter-related protein.
  
     0.694
Sros_4690
KEGG: atu:Atu5178 ABC transporter, nucleotide binding/ATPase protein.
  
     0.685
Sros_9108
ABC-type branched-chain amino acid transport systems ATPase component-like protein; KEGG: rle:pRL90261 putative ATP-binding ABC transporter.
  
     0.669
Sros_7746
KEGG: pla:Plav_1100 ABC transporter related.
  
     0.655
Sros_4413
KEGG: pla:Plav_1100 ABC transporter related.
  
     0.653
Sros_0270
KEGG: aeh:Mlg_2408 ABC transporter related.
  
     0.644
Sros_1875
KEGG: hypothetical LOC575627.
 
     0.628
Sros_6439
KEGG: rsk:RSKD131_4558 ABC transporter related.
  
     0.595
Sros_1074
ABC-type transport system involved in resistance to organic solvents ATPase component-like protein; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
  
     0.580
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.