STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1908KEGG: bte:BTH_I1321 hypothetical protein. (209 aa)    
Predicted Functional Partners:
Sros_4020
KEGG: met:M446_0626 SNARE associated Golgi protein.
  
     0.697
Sros_0392
KEGG: pfl:PFL_5476 DedA family protein.
  
     0.616
Sros_0828
KEGG: afr:AFE_2527 membrane protein, DedA family.
  
     0.612
Sros_6733
KEGG: afr:AFE_2527 membrane protein, DedA family.
  
     0.564
Sros_4049
KEGG: par:Psyc_0191 alkaline phosphatase.
  
     0.549
Sros_9346
KEGG: par:Psyc_0191 alkaline phosphatase.
  
     0.530
Sros_1909
Signal transduction histidine kinase-like protein; KEGG: scl:sce5432 putative two-component system sensor kinase.
       0.411
Sros_1910
KEGG: scl:sce5431 two-component system response regulator.
       0.411
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.