STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1942Hypothetical protein; KEGG: dat:HRM2_41140 permease of the drug/metabolite transporter (DMT) superfamily. (322 aa)    
Predicted Functional Partners:
Sros_5129
KEGG: jan:Jann_2411 hypothetical protein.
 
     0.706
Sros_7774
KEGG: jan:Jann_2411 hypothetical protein.
 
     0.644
Sros_1940
KEGG: mlo:mll2946 hypothetical protein.
 
     0.642
Sros_2338
KEGG: bbr:BB0827 hypothetical protein.
 
     0.621
Sros_6164
KEGG: bbr:BB0827 hypothetical protein.
 
     0.614
Sros_1941
Transcriptional regulator, CdaR; KEGG: bha:BH1735 hypothetical protein.
 
     0.600
Sros_1957
Putative transcriptional regulator, PucR family; KEGG: pag:PLES_34081 putative regulatory protein.
  
     0.536
Sros_8299
KEGG: jan:Jann_2411 hypothetical protein.
 
     0.464
Sros_7788
KEGG: gsu:GSU0574 hypothetical protein.
  
     0.453
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.