STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1951KEGG: mes:Meso_1834 binding-protein-dependent transport systems inner membrane component. (325 aa)    
Predicted Functional Partners:
Sros_1952
KEGG: cja:CJA_2055 oligopeptide ABC transporter, permease protein.
  
 0.965
Sros_1954
ABC-type dipeptide transport system periplasmic component-like protein; KEGG: mes:Meso_1835 extracellular solute-binding protein, family 5.
 
 
 0.921
Sros_1953
KEGG: oca:OCAR_7522 glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.920
Sros_7098
KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component.
  
 0.854
Sros_3511
KEGG: bha:BH0030 oligopeptide ABC transporter (permease).
  
 0.843
Sros_7206
KEGG: prw:PsycPRwf_0024 oligopeptide transporter ATP-binding component; Belongs to the ABC transporter superfamily.
   0.840
Sros_5267
KEGG: sme:SMa0469 ABC transporter, permease.
  
 0.839
Sros_7096
ABC-type dipeptide transport system periplasmic component-like protein; KEGG: mes:Meso_1835 extracellular solute-binding protein, family 5.
 
 
 0.837
Sros_3037
KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component.
  
 0.836
Sros_1573
KEGG: aba:Acid345_1395 ABC peptide transporter, inner membrane subunit.
    0.835
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.