STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1967KEGG: mxa:MXAN_1267 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Sros_7041
Hypothetical protein.
  
     0.768
arc
ATP-dependent 26S proteasome regulatory subunit- like protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.
  
    0.766
Sros_8078
KEGG: mxa:MXAN_1973 hypothetical protein.
  
     0.741
Sros_7066
Hypothetical protein.
  
     0.740
Sros_8323
Hypothetical protein; KEGG: tgr:Tgr7_1713 putative transmembrane anti- sigma factor.
  
     0.650
Sros_0482
Hypothetical protein; KEGG: dsh:Dshi_1125 type II secretion system protein.
  
     0.646
Sros_0006
Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives-like protein; KEGG: geo:Geob_1482 protein of unknown function DUF721.
  
     0.635
Sros_7059
Hypothetical protein.
  
     0.625
Sros_1385
KEGG: acp:A2cp1_1564 protein of unknown function DUF1025.
  
     0.618
Sros_2678
KEGG: afw:Anae109_1530 response regulator receiver protein.
  
    0.612
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.