STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1971Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: nar:Saro_1469 luciferase-like. (416 aa)    
Predicted Functional Partners:
Sros_1972
Hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein; KEGG: met:M446_1736 alpha/beta hydrolase fold.
 
    0.890
Sros_1973
KEGG: swi:Swit_2098 luciferase family protein.
 
     0.836
Sros_1970
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_2098 luciferase family protein.
 
     0.825
Sros_1979
ABC-type branched-chain amino acid transport systems periplasmic component-like protein; KEGG: reh:H16_A3293 ABC-type transporter, periplasmic component.
  
    0.769
Sros_2594
Hypothetical protein; KEGG: swi:Swit_2804 membrane-like protein.
  
     0.765
Sros_1980
ABC-type branched-chain amino acid transport systems ATPase component-like protein; KEGG: dar:Daro_4098 inner-membrane translocator:ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
     0.752
Sros_1987
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_0704 luciferase family protein.
  
     0.750
Sros_8137
Protoporphyrinogen oxidase-like protein; KEGG: asa:ASA_2554 hypothetical protein.
  
     0.688
Sros_2517
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: bpm:BURPS1710b_A2187 luciferase-like monooxygenase.
  
     0.673
Sros_1996
KEGG: swi:Swit_3647 isochorismatase hydrolase.
  
    0.666
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.