STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1979ABC-type branched-chain amino acid transport systems periplasmic component-like protein; KEGG: reh:H16_A3293 ABC-type transporter, periplasmic component. (419 aa)    
Predicted Functional Partners:
Sros_1980
ABC-type branched-chain amino acid transport systems ATPase component-like protein; KEGG: dar:Daro_4098 inner-membrane translocator:ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.990
Sros_4713
KEGG: rpd:RPD_3562 putative leucine/isoleucine/valine-binding protein precursor.
  
  
  0.952
Sros_7508
KEGG: bmf:BAB2_1132 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative.
  
  
  0.914
Sros_2956
KEGG: pna:Pnap_3860 extracellular ligand-binding receptor.
     
  0.900
Sros_6002
KEGG: mag:amb2981 ABC-type branched-chain amino acid transport systems, periplasmic component.
     
  0.900
Sros_7509
KEGG: bov:BOV_A1078 branched chain amino acid ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.823
Sros_2594
Hypothetical protein; KEGG: swi:Swit_2804 membrane-like protein.
  
     0.773
Sros_1971
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: nar:Saro_1469 luciferase-like.
  
    0.769
Sros_1981
KEGG: glo:Glov_1864 ABC transporter related.
 
  
 0.762
Sros_7649
KEGG: bar:GBAA4238 hypothetical protein.
  
     0.726
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.