STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2000KEGG: mxa:MXAN_1727 transcriptional regulator, TetR family. (201 aa)    
Predicted Functional Partners:
Sros_2001
KEGG: bmj:BMULJ_03346 putative short-chain alcohol dehydrogenase.
 
     0.788
Sros_7857
Hypothetical protein; KEGG: mxa:MXAN_6275 transcriptional regulator, ArsR family.
  
     0.545
Sros_9025
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_2098 luciferase family protein.
  
     0.531
Sros_5246
KEGG: mxa:MXAN_6210 hypothetical protein.
  
     0.520
Sros_5275
KEGG: dac:Daci_3578 TetR family transcriptional regulator.
  
     0.519
Sros_8233
KEGG: hypothetical protein.
  
     0.511
Sros_0305
Hypothetical protein; KEGG: GA18158 gene product from transcript GA18158- RA; K01290 carboxypeptidase A.
  
     0.486
Sros_7143
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: pde:Pden_1120 luciferase family protein.
  
     0.459
Sros_4140
KEGG: mlo:mlr3943 hypothetical protein.
  
     0.446
Sros_3153
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_2098 luciferase family protein.
  
     0.436
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.