STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2097KEGG: ara:Arad_3849 hypothetical protein. (200 aa)    
Predicted Functional Partners:
Sros_2096
KEGG: xau:Xaut_1317 GntR family transcriptional regulator.
     0.815
Sros_2098
KEGG: bac:BamMC406_2847 CutC family protein; Belongs to the CutC family.
       0.631
Sros_8353
Hypothetical protein; KEGG: acp:A2cp1_3121 UBA/ThiF-type NAD/FAD binding protein.
  
    0.469
Sros_8401
KEGG: hypothetical protein LOC739882.
  
     0.429
Sros_8441
Hypothetical protein; KEGG: pen:PSEEN0303 RNA polymerase factor sigma-32.
  
    0.425
Sros_8471
Hypothetical protein; KEGG: bpm:BURPS1710b_1102 putative lipoprotein.
  
     0.416
Sros_6403
Hypothetical protein; KEGG: GF21951 gene product from transcript GF21951- RA.
  
     0.412
Sros_1186
Acyltransferase-like protein; KEGG: bbt:BBta_5645 putative acyltransferase, group 3.
  
     0.406
Sros_0545
Hypothetical protein; KEGG: GK17443 gene product from transcript GK17443- RA.
  
     0.403
Sros_8589
Hypothetical protein; KEGG: rsk:RSKD131_1496 beta-mannanase precursor; Belongs to the glycosyl hydrolase 26 family.
  
     0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.