STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2139Putative transcriptional regulator, PucR family; KEGG: pag:PLES_34081 putative regulatory protein. (514 aa)    
Predicted Functional Partners:
Sros_2138
Putative transcriptional activator, TenA family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
       0.709
Sros_6626
Putative translation initiation inhibitor yjgF family-like protein; KEGG: bbr:BB1760 hypothetical protein.
  
     0.522
Sros_7410
Hypothetical protein; KEGG: hpj:jhp0274 putative vacuolating cytotoxin (VacA) paralog.
  
     0.448
Sros_4288
KEGG: bur:Bcep18194_B1394 CdaR family transcriptional regulator.
  
     0.434
Sros_4228
Hypothetical protein; KEGG: asa:ASA_2211 major facilitator transporter.
  
     0.433
Sros_1461
Transcriptional regulator, SARP family; KEGG: scl:sce3550 hypothetical protein.
  
    0.418
Sros_5477
Transcriptional regulator, CdaR; KEGG: eca:ECA3300 carbohydrate diacid transcriptional activator CdaR.
 
     0.402
Sros_2137
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.401
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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