STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2175Competence/damage-inducible protein cinA; KEGG: hypothetical protein; Belongs to the CinA family. (167 aa)    
Predicted Functional Partners:
Sros_9157
Aspartate oxidase-like protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.952
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
 
 0.948
Sros_1722
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.938
Sros_0267
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase-like protein; KEGG: har:HEAR1476 putative 5'-nucleotidase family protein precursor.
  
 
  0.907
Sros_0894
KEGG: scl:sce7039 putative 5'-nucleotidase family protein; Belongs to the 5'-nucleotidase family.
  
 
  0.907
Sros_8362
NAD(+) diphosphatase; KEGG: sfu:Sfum_1412 NUDIX hydrolase.
     
 0.906
Sros_0804
Nucleotidase; KEGG: sse:Ssed_2354 nucleotidase.
    
  0.903
Sros_2174
KEGG: dvl:Dvul_1316 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.894
rimO
RNA modification enzyme, MiaB-family; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
  
  
 0.793
Sros_2172
KEGG: tbd:Tbd_0593 hypothetical protein.
  
    0.716
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.