STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2273DNA uptake protein and related DNA-binding protein-like protein; KEGG: bsu:BSU25590 unspecific high-affinity DNA- binding protein. (259 aa)    
Predicted Functional Partners:
Sros_2275
Hydrolase (metallo-beta-lactamase superfamily)- like protein; KEGG: afw:Anae109_2499 DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.853
Sros_6538
KEGG: azo:azo3236 prepilin peptidase; Belongs to the peptidase A24 family.
   
  
 0.774
Sros_4551
rRNA (adenine-N(6)-)-methyltransferase; KEGG: acr:Acry_2624 dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
    0.709
Sros_6114
Acetyltransferase involved in intracellular survival and related acetyltransferase-like protein; KEGG: mxa:MXAN_5851 acetyltransferase, GNAT family.
  
    0.702
Sros_7318
Acetyltransferase; KEGG: scl:sce0310 acetyltransferase.
  
    0.702
Sros_1348
Transcriptional regulator-like protein; KEGG: bha:BH3670 attenuator for lytABC and LytR expression.
 
     0.565
Sros_1858
Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein; KEGG: bmj:BMULJ_00105 DNA processing protein.
 
  
 0.536
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.526
Sros_6528
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.516
Sros_0120
Transcriptional regulator-like protein; KEGG: hypothetical protein.
 
     0.500
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.