STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2345Hypothetical protein; KEGG: dol:Dole_0326 antibiotic biosynthesis monooxygenase. (92 aa)    
Predicted Functional Partners:
Sros_2356
Hypothetical protein.
  
     0.712
glyQS
Anticodon binding domain protein; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.624
Sros_9321
Hypothetical protein.
  
     0.615
Sros_7968
KEGG: hypothetical protein.
  
     0.587
Sros_2144
KEGG: lpf:lpl0208 hypothetical protein.
 
     0.580
Sros_3349
Hypothetical protein.
 
    0.579
Sros_2340
KEGG: gur:Gura_3002 ferric uptake regulator family protein; Belongs to the Fur family.
       0.573
Sros_2342
KEGG: rpe:RPE_2839 ABC transporter related.
       0.571
Sros_2343
KEGG: glo:Glov_1833 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.561
Sros_6748
KEGG: hypothetical protein.
  
   
 0.547
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.