STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2354Dyp-type peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (402 aa)    
Predicted Functional Partners:
Sros_2353
KEGG: nmn:NMCC_0036 hypothetical protein.
 
  
 0.985
Sros_3399
KEGG: dsh:Dshi_2585 hypothetical protein.
 
  
 0.800
Sros_4979
Hypothetical protein; KEGG: bra:BRADO4155 copper resistance protein.
 
  
 0.631
Sros_6847
Conserved hypothetical protein of Cu resistance protein CopC-like protein; KEGG: bra:BRADO4155 copper resistance protein.
 
  
 0.628
Sros_2355
KEGG: hypothetical protein.
       0.576
Sros_2356
Hypothetical protein.
       0.576
Sros_2571
Conserved hypothetical protein containing Cu resistance protein-like domain; KEGG: bja:bll4878 copper export protein.
  
  
 0.573
Sros_0962
KEGG: mex:Mext_1378 hypothetical protein.
  
    0.533
tatA
Sec-independent translocation protein MttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
  
 0.467
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
       0.425
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.