Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sros_1131 | Sros_2410 | Sros_1131 | Sros_2410 | KEGG: dal:Dalk_0113 SMC domain protein. | KEGG: sme:SMc03901 hypothetical protein. | 0.491 |
Sros_2015 | Sros_2410 | Sros_2015 | Sros_2410 | Hypothetical protein. | KEGG: sme:SMc03901 hypothetical protein. | 0.652 |
Sros_2015 | Sros_4694 | Sros_2015 | Sros_4694 | Hypothetical protein. | KEGG: bch:Bcen2424_1195 transposase IS116/IS110/IS902 family protein. | 0.427 |
Sros_2015 | vapC | Sros_2015 | Sros_2013 | Hypothetical protein. | Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.433 |
Sros_2408 | Sros_2409 | Sros_2408 | Sros_2409 | Hypothetical protein. | KEGG: sat:SYN_01388 putative cytoplasmic protein. | 0.514 |
Sros_2408 | Sros_2410 | Sros_2408 | Sros_2410 | Hypothetical protein. | KEGG: sme:SMc03901 hypothetical protein. | 0.514 |
Sros_2409 | Sros_2408 | Sros_2409 | Sros_2408 | KEGG: sat:SYN_01388 putative cytoplasmic protein. | Hypothetical protein. | 0.514 |
Sros_2409 | Sros_2410 | Sros_2409 | Sros_2410 | KEGG: sat:SYN_01388 putative cytoplasmic protein. | KEGG: sme:SMc03901 hypothetical protein. | 0.798 |
Sros_2410 | Sros_1131 | Sros_2410 | Sros_1131 | KEGG: sme:SMc03901 hypothetical protein. | KEGG: dal:Dalk_0113 SMC domain protein. | 0.491 |
Sros_2410 | Sros_2015 | Sros_2410 | Sros_2015 | KEGG: sme:SMc03901 hypothetical protein. | Hypothetical protein. | 0.652 |
Sros_2410 | Sros_2408 | Sros_2410 | Sros_2408 | KEGG: sme:SMc03901 hypothetical protein. | Hypothetical protein. | 0.514 |
Sros_2410 | Sros_2409 | Sros_2410 | Sros_2409 | KEGG: sme:SMc03901 hypothetical protein. | KEGG: sat:SYN_01388 putative cytoplasmic protein. | 0.798 |
Sros_2410 | Sros_3455 | Sros_2410 | Sros_3455 | KEGG: sme:SMc03901 hypothetical protein. | WD40 repeat-domain-containing protein-like protein; KEGG: scl:sce3630 WD repeat-containing protein. | 0.453 |
Sros_2410 | Sros_4694 | Sros_2410 | Sros_4694 | KEGG: sme:SMc03901 hypothetical protein. | KEGG: bch:Bcen2424_1195 transposase IS116/IS110/IS902 family protein. | 0.501 |
Sros_2410 | vapC | Sros_2410 | Sros_2013 | KEGG: sme:SMc03901 hypothetical protein. | Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.674 |
Sros_2410 | vapC-2 | Sros_2410 | Sros_2230 | KEGG: sme:SMc03901 hypothetical protein. | Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.663 |
Sros_3455 | Sros_2410 | Sros_3455 | Sros_2410 | WD40 repeat-domain-containing protein-like protein; KEGG: scl:sce3630 WD repeat-containing protein. | KEGG: sme:SMc03901 hypothetical protein. | 0.453 |
Sros_4694 | Sros_2015 | Sros_4694 | Sros_2015 | KEGG: bch:Bcen2424_1195 transposase IS116/IS110/IS902 family protein. | Hypothetical protein. | 0.427 |
Sros_4694 | Sros_2410 | Sros_4694 | Sros_2410 | KEGG: bch:Bcen2424_1195 transposase IS116/IS110/IS902 family protein. | KEGG: sme:SMc03901 hypothetical protein. | 0.501 |
Sros_4694 | vapC | Sros_4694 | Sros_2013 | KEGG: bch:Bcen2424_1195 transposase IS116/IS110/IS902 family protein. | Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.495 |
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