STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2425KEGG: scl:sce2385 hypothetical protein. (767 aa)    
Predicted Functional Partners:
Sros_2423
KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase.
  
  
 0.877
Sros_2421
KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
 
  
 0.864
Sros_2428
Thioesterase; KEGG: scl:sce0356 thioesterase.
      0.827
Sros_2429
KEGG: bma:BMAA1021 thiotemplate mechanism natural product synthetase.
 
  
 0.827
Sros_8815
Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase.
  
  
 0.816
Sros_2420
Non-ribosomal peptide synthetase modules and related protein-like protein; KEGG: scl:sce8262 non-ribosomal peptide synthetase.
 
  
 0.814
Sros_2422
KEGG: bxe:Bxe_B0518 hypothetical protein.
  
  
 0.808
Sros_2424
KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase.
 
    0.805
Sros_2419
KEGG: ppu:PP_4222 SyrP protein, putative.
  
  
 0.790
Sros_3766
KEGG: dde:Dde_1609 amino acid adenylation.
  
  
 0.778
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.