STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2440KEGG: psa:PST_2112 probable ring-cleaving dioxygenase. (150 aa)    
Predicted Functional Partners:
Sros_2441
KEGG: tmz:Tmz1t_1060 protein of unknown function DUF1486.
  
    0.838
Sros_8414
KEGG: aeh:Mlg_1341 sigma E regulatory protein, MucB/RseB.
  
     0.637
Sros_2439
KEGG: rle:RL2983 putative aldo/keto reductase.
 
    0.610
Sros_4920
KEGG: sus:Acid_4036 spore coat assembly protein- like protein.
 
    0.608
Sros_9099
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
    0.528
Sros_5380
KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain, ATP-binding.
 
 
 0.493
Sros_3034
KEGG: swd:Swoo_1394 hypothetical protein.
  
     0.463
Sros_0821
KEGG: hypothetical protein.
  
     0.455
Sros_3949
Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: sml:Smlt2488 hypothetical protein.
 
   
 0.452
Sros_0731
Hypothetical protein; KEGG: mno:Mnod_6182 peptidase C14 caspase catalytic subunit P20.
  
     0.448
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.