STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2488KEGG: ade:Adeh_2191 LuxR family transcriptional regulator. (359 aa)    
Predicted Functional Partners:
Sros_2487
KEGG: mes:Meso_3022 hypothetical protein.
 
     0.633
Sros_2489
Putative transcriptional regulator, MerR family; KEGG: xcb:XC_1280 SoxR family transcriptional regulator.
       0.548
Sros_8236
ABC-type sugar transport system periplasmic component-like protein; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1.
  
     0.522
Sros_2037
KEGG: bph:Bphy_4577 cyclic nucleotide-binding protein.
 
 
 0.439
Sros_8233
KEGG: hypothetical protein.
  
    0.439
Sros_5791
KEGG: sus:Acid_1756 transcriptional regulator, TrmB.
 
   0.431
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
   
 
 0.417
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
   
 
 0.417
Sros_6953
KEGG: pmy:Pmen_2973 hypothetical protein.
  
    0.416
Sros_7752
KEGG: reh:H16_A0855 transcriptional regulator, TetR/AcrR-family.
  
     0.416
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.