STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2509KEGG: hypothetical protein. (750 aa)    
Predicted Functional Partners:
Sros_2508
KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
 
     0.802
Sros_0920
Beta-lactamase; KEGG: mxa:MXAN_2150 beta-lactamase.
  
     0.649
Sros_0982
KEGG: hypothetical protein.
  
     0.576
Sros_0702
Hypothetical protein; KEGG: ank:AnaeK_0467 exonuclease SbcC.
  
     0.532
Sros_2448
KEGG: xca:xccb100_1767 putative secreted protein.
  
    0.530
Sros_5375
KEGG: hypothetical protein.
  
     0.523
Sros_8746
KEGG: hch:HCH_00977 hypothetical protein.
  
     0.496
Sros_4031
Lantibiotic modifying protein-like protein; KEGG: sus:Acid_6416 lanthionine synthetase C family protein.
  
     0.482
Sros_2506
KEGG: psb:Psyr_1940 LuxR response regulator receiver.
       0.439
Sros_2507
Signal transduction histidine kinase-like protein; KEGG: bmb:BruAb1_0367 sensor histidine kinase.
       0.439
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.