STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2525KEGG: rru:Rru_A0492 hypothetical protein. (229 aa)    
Predicted Functional Partners:
Sros_2522
KEGG: dac:Daci_3729 periplasmic binding protein.
 
   
 0.739
Sros_2524
KEGG: rsk:RSKD131_3579 ABC transporter related.
 
     0.733
Sros_2523
KEGG: bha:BH1586 ferric ion ABC transpoter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.692
Sros_2526
KEGG: met:M446_0452 hypothetical protein.
       0.678
Sros_1629
ABC-type transport system involved in lipoprotein release permease component-like protein; KEGG: mpt:Mpe_A2068 hypothetical protein.
  
     0.456
Sros_5595
Precorrin-3B methylase-like protein; KEGG: bac:BamMC406_1589 precorrin-3B C17- methyltransferase.
     
 0.436
Sros_0805
Hypothetical protein; KEGG: bid:Bind_1545 thymidylate synthase.
  
     0.407
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.