STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2588KEGG: scl:sce1560 hypothetical protein. (335 aa)    
Predicted Functional Partners:
Sros_2589
KEGG: mlo:mlr3510 threonine dehydratase.
       0.741
Sros_2587
Cystathionine gamma-synthase; KEGG: cko:CKO_04984 hypothetical protein.
       0.594
Sros_6648
KEGG: hypothetical protein LOC679314.
  
     0.509
Sros_4087
KEGG: scl:sce1537 hypothetical protein.
  
     0.465
Sros_1510
KEGG: noc:Noc_0166 TPR repeat-containing protein.
  
     0.453
Sros_2586
KEGG: kpn:KPN_00421 GntR family transcriptional regulator.
       0.438
Sros_5960
Molecular chaperone GrpE (heat shock protein)- like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the re [...]
  
     0.434
Sros_7666
Glycosyltransferase probably involved in cell wall biogenesis-like protein; KEGG: mno:Mnod_6856 glycosyl transferase family 2.
  
     0.407
Sros_0013
Hypothetical protein.
  
     0.405
Sros_5175
KEGG: rle:RL0472 TetR family transcriptional regulator.
  
     0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.