STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2675KEGG: vei:Veis_4950 Rieske (2Fe-2S) domain- containing protein. (369 aa)    
Predicted Functional Partners:
Sros_2674
Cytochrome b subunit of the bc complex-like protein; KEGG: sus:Acid_6208 cytochrome b/b6 domain- containing protein.
 
 0.999
Sros_2676
Hypothetical protein; KEGG: tbd:Tbd_2545 putative cytochrome c.
 
 0.999
Sros_2677
Cytochrome-c oxidase; KEGG: mch:Mchl_4704 cytochrome o ubiquinol oxidase, subunit III.
 
 
 0.999
Sros_5031
KEGG: glo:Glov_1196 cytochrome b/b6 domain.
 
 0.999
Sros_8374
Cytochrome b subunit of the bc complex-like protein; KEGG: sus:Acid_6208 cytochrome b/b6 domain- containing protein.
 
 0.999
Sros_2670
KEGG: pae:PA0105 cytochrome c oxidase, subunit II.
 
 
 0.997
Sros_2672
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
 
 0.997
Sros_2133
KEGG: dal:Dalk_4744 peptidase M16 domain protein; Belongs to the peptidase M16 family.
   
 0.996
Sros_2671
Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 
 0.995
Sros_6353
Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 
 0.995
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.