STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2702KEGG: afw:Anae109_2670 endonuclease/exonuclease/phosphatase. (232 aa)    
Predicted Functional Partners:
Sros_0495
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: bsu:BSU04720 serine-protein kinase RsbW.
 
    0.608
Sros_2703
KEGG: scl:sce8284 hypothetical protein.
       0.603
Sros_2701
KEGG: sfu:Sfum_1953 ROK family protein.
      0.575
Sros_8485
Hypothetical protein.
  
     0.538
Sros_5629
Putative signal transduction histidine kinase.
  
     0.532
Sros_0966
Hypothetical protein; KEGG: prw:PsycPRwf_0043 transglycosylase-associated protein.
 
  
 0.519
Sros_6053
KEGG: bha:BH2768 hypothetical protein.
  
     0.509
Sros_0536
Hypothetical protein.
 
   
 0.493
Sros_8346
Nucleoside-diphosphate-sugar epimerase-like protein; KEGG: dal:Dalk_1637 NAD-dependent epimerase/dehydratase.
  
     0.493
Sros_0138
KEGG: bha:BH0549 hypothetical protein.
 
     0.470
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.