STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2743Putative transcriptional regulator, MerR family; KEGG: bja:blr0521 hypothetical protein. (243 aa)    
Predicted Functional Partners:
Sros_2742
KEGG: scl:sce2130 hypothetical protein.
 
     0.959
Sros_5721
KEGG: ade:Adeh_3797 hypothetical protein.
  
    0.665
Sros_7624
KEGG: scl:sce8284 hypothetical protein.
  
     0.643
Sros_0911
KEGG: shn:Shewana3_1825 ATPase-like protein.
  
     0.642
Sros_5341
KEGG: bha:BH0641 hypothetical protein.
  
     0.587
Sros_4679
KEGG: vesicular transport-associated repeat protein.
  
     0.579
Sros_3178
KEGG: efe:EFER_2184 hypothetical protein.
  
     0.577
Sros_2741
KEGG: scl:sce1630 hypothetical protein.
       0.570
Sros_2744
KEGG: mrd:Mrad2831_4692 ferritin Dps family protein; Belongs to the Dps family.
  
  
 0.565
Sros_6917
KEGG: mxa:MXAN_5173 hypothetical protein.
  
     0.536
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.