STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2753KEGG: met:M446_5167 MarR family transcriptional regulator. (299 aa)    
Predicted Functional Partners:
Sros_2949
KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
     
 0.614
Sros_2754
KEGG: sus:Acid_6335 hypothetical protein.
       0.523
argG
KEGG: bha:BH3187 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
  
 0.490
Sros_4486
KEGG: cvi:CV_0459 ArsR family transcriptional regulator.
 
     0.445
Sros_3318
Sialic acid synthase-like protein; KEGG: aba:Acid345_2841 N-acetylneuraminate synthase.
       0.432
Sros_6172
KEGG: scl:sce4807 hypothetical protein.
  
   0.421
argG-2
KEGG: lch:Lcho_0912 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
  
 0.421
Sros_7149
Hypothetical protein.
  
     0.413
Sros_5380
KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain, ATP-binding.
  
  
 0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.