STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2857Hypothetical protein. (132 aa)    
Predicted Functional Partners:
Sros_2672
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.754
Sros_6722
Hypothetical protein.
  
     0.735
Sros_2676
Hypothetical protein; KEGG: tbd:Tbd_2545 putative cytochrome c.
  
     0.714
Sros_2675
KEGG: vei:Veis_4950 Rieske (2Fe-2S) domain- containing protein.
  
     0.679
Sros_5031
KEGG: glo:Glov_1196 cytochrome b/b6 domain.
  
     0.639
Sros_6816
Zn-ribbon protein possibly nucleic acid-binding- like protein; KEGG: gbm:Gbem_0479 protein of unknown function DUF164.
  
     0.627
dinB
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.626
Sros_5862
Transcriptional regulator protein-like protein; KEGG: mxa:MXAN_1359 hypothetical protein.
  
     0.610
Sros_6009
Uncharacterized protein required for cytochrome oxidase assembly-like protein; KEGG: aeh:Mlg_0300 cytochrome oxidase assembly.
  
     0.583
Sros_1835
Hypothetical protein.
  
     0.564
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.