STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2885KEGG: pmr:PMI1698 hypothetical protein. (103 aa)    
Predicted Functional Partners:
Sros_2886
KEGG: mxa:MXAN_5158 AzlC family protein.
 
  
 0.983
Sros_5907
Branched-chain amino acid permease (azaleucine resistance)-like protein; KEGG: mxa:MXAN_5158 AzlC family protein.
 
  
 0.868
Sros_2887
KEGG: pen:PSEEN3375 transcriptional regulator, AraC family.
       0.772
Sros_7860
Branched-chain amino acid permease (azaleucine resistance)-like protein; KEGG: sbl:Sbal_4248 AzlC family protein.
  
  
 0.701
Sros_2888
KEGG: mxa:MXAN_2255 serine/threonine protein kinase.
       0.623
Sros_2884
KEGG: ank:AnaeK_3707 serine/threonine protein kinase.
       0.522
Sros_2889
KEGG: sfu:Sfum_2537 serine/threonine protein kinase with TPR repeats.
       0.504
Sros_2144
KEGG: lpf:lpl0208 hypothetical protein.
 
     0.455
Sros_8870
KEGG: hha:Hhal_1735 putative ABC transporter.
 
     0.441
Sros_8007
KEGG: hypothetical protein.
  
     0.415
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.